Avian Flu Grid

NBCR Summer Institute
PRAGMA Institute

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Relaxed Complex Method
 
NAMD
Amber
Gromos
Gromacs
 
Virtual Screening
AutoDock
MGLTools
Resources
 
The RC/MD workflow is complex and computationally demanding, but with strong potentials for application to other infectious diseases. While the MD simulations are more scalable in a high performance computing cluster with low latency network, the virtual screening process requires little interprocessor communication and is highly suitable for a distributed grid environment. [...]

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The avian influenza virus type A, especially subtype H5N1, is becoming the world’s largest pandemic threat due to its high virulence and lethality rate in birds, quickly expanding host reservoir, and high rate of mutations. The two surface glycoproteins, hemagglutinin (HA) and neuraminidase (NA) of influenza virus play important roles in the interactions with cellular [...]

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NBCR
PRAGMA Grid
TeraGrid
Maui High Performance Computing Center
MGrid

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Project Wiki

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Anne Westbrook, Ph.D.
Amber Stanley
and previously
Mary Kratz, Ph.D.

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PRAGMA
NBCR
PRIME
University of Hawaii
Jilin University
AIST
University of Tsukuba
CNIC
Konkuk University
USM
NTU

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Avian Flu Grid Home Page
PRAGMA Biosciences Portal
Avian Flu Info (Chinese/English)
CNIC portal for Bird Flu and related Pandemic Diseases (Chinese)
Glyco-MGrid

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Options for the Control of Influenza VI
Avianflu.gov
CDC Influenza site
WHO Avian Flu site
Nature Magazine: Avian Flu Web Focus
Wikipedia on Bird Flu
Flu Wiki

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Anti-influenza conference, June 2007
Options for Control of Influenza VI, June 2007
Bangkok International Conference on Avian Flu January 2008
World Summit on Antivirals, July 2008
BirdFlu September 2008

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